This list only shows publications with contributions from BioproEng doctoral candidates. Faculty-only publications are not included.

(Highlighted are BioproEng doctoral candidates and faculty members) 


Vazulka, S., Schiavinato, M., Wagenknecht, M., Cserjan, M., and Striedner, G. (2022). Microbioreactor Cultivations of Fab-Producing Escherichia coli Reveal Genome-Integrated Systems as Suitable for Prospective Studies on Direct Fab Expression Effects. ACS Synthetic Biology. doi: 10.1021/acssynbio.1c00502


Satzer, P., Komuczki, D., Pappenreiter, M., Cataldo, A. L., Sissolak, B., and Jungbauer, A. (2021). Impact of failure rates, lot definitions and scheduling of upstream processes on the productivity of continuous integrated bioprocesses. J Chem Technol Biotechnol., early view. doi:10.1002/jctb.6648

Beck, J., von Lieres, E., Zaghi, N., Leweke, S, Carta, G., and Hahn, R. (2021). Patterns of protein adsorption on ion-exchange particles and columns: Evolution of protein concentration profiles during load, hold, and wash steps predicted for pore and solid diffusion mechanisms. Journal of Chromatography A, 1653, 462412. doi:10.1016/j.chroma.2021.462412

Christler, A., Scharl-Hirsch, T., Sauer, D., Köppl, J., Toy, C., Melcher, M., Jungbauer, A., and Dürauer, A. (2021). Technology transfer of a monitoring system to predict product quantity and purity of biopharmaceuticals in real-time during chromatographic separation. Biotechnology & Bioengineering, 118(10), 3941-3952. doi:10.1002/bit.27870

Erian, A., and Sauer, M. (2021). Utilizing yeasts for the conversion of renewable feedstocks to sugar alcohols - A review. Bioresource Technology, 126296. doi:10.1016/j.biortech.2021.126296

Hoheneder, R., Fitz, E., Bischof, R., Russmayer, H., Ferrero, P., Peacock, S., and Sauer, M. (2021). Efficient conversion of hemicellulose sugars from spent sulfite liquor into optically pure L-lactic acid by Enterococcus mundtii. Bioresource Technology, 333, 125215. doi:10.1016/j.biortech.2021.125215

Klausberger, M., Duerkop, M., Haslacher, H., Wozniak-Knopp, G., Cserjan-Puschmann, M., Perkmann, T., Lingg, N., Aguilar, P. P., Laurent, E., De Vos, J., Hofner, M., Holzer, B., Stadler, M., Manhart, G., Vierlinger, K., Egger, M., Milchram, L., Gludovacz, E., Marx, N., Köppl, C, Tauer, C., Beck, J, Maresch, D., Grünwald-Gruber, C., Strobl, F., Satzer, P., Stadlmayr, G., Vavra, U., Huber, J., Wahrmann, M., Eskandary, F., Breyer, M.K., Sieghart, D., Quehenberger, P., Leitner, G., Strassl, R., Egger, A. E., Irsara, C., Griesmacher, A., Hoermann, G., Weiss, G., Bellmann-Weiler, R., Loeffler-Ragg, J., Borth, N., Strasser, R., Jungbauer, A., Hahn, R., Mairhofer, J., Hartmann, B., Binder, N.B., Striedner, G., Mach, L., Weinhäusel, A., Dieplinger, B., Grebien, F., Gerner, W., Binder, C. J., and Grabherr, R. (2021). A comprehensive antigen production and characterisation study for easy-to-implement, specific and quantitative SARS-CoV-2 serotests. EBioMedicine, 67, 103348. doi:10.1016/j.ebiom.2021.103348

Komuczki, D., Dutra, G., Gstöttner, C., Dominguez-Vega, E., Jungbauer, A., and Satzer, P. (2021). Media on-demand: Continuous reconstitution of a chemically defined media directly from solids. Biotechnology and Bioengineering, 118(9), 3382-3394. doi:10.1002/bit.27738

Krippl, M., Kargl, T., Duerkop, M., and Dürauer, A. (2021). Hybrid modeling reduces experimental effort to predict performance of serial and parallel single-pass tangential flow filtration, Sep. Purif. Technol., 276, 119277. doi:10.1016/j.seppur.2021.119277

Lali, N., Jungbauer, A., Satzer, P. (2021). Traceability of products and guide for batch definition in integrated continuous biomanufacturing. Journal of Chemical Technology & Biotechnology, early view. doi:10.1002/jctb.6953

Montes-Serrano, I., Satzer, P., Jungbauer, A., and Dürauer, A. (2021) Characterization of hydrodynamics and volumetric power input in microtiter plates for the scale-up of downstream operations. Biotechnol Bioeng., 119(2), 523-534. doi:10.1002/bit.27983

Štor, J., Ruckerbauer, DE., Széliová, D., Zanghellini, J., and Borth, N. (2021). Towards rational glyco-engineering in CHO: from data to predictive models. Current Opinion in Biotechnology, 71, 9-17. doi:10.1016/j.copbio.2021.05.003

Széliová, D., Štor, J., Thiel, I., Weinguny, M., Hanscho, M., Lhota, G., Borth, N., Zanghellini, J., Ruckerbauer, D. E., and Rocha, I. (2021). Inclusion of maintenance energy improves the intracellular flux predictions of CHO. PLoS computational biology, 17(6), e1009022. doi:10.1371/journal.pcbi.1009022

Totaro, D., Radoman, B., Schmelzer, B., Rothbauer, M., Steiger, M.G., Mayr, T., Sauer, M., Ertl, P., and Mattanovich, D. (2021). Microscale Perfusion-Based Cultivation for Pichia pastoris Clone Screening Enables Accelerated and Optimized Recombinant Protein Production Processes. Biotechnology Journal, 16(3), 2000215. doi:10.1002/biot.202000215


Komuczki, D., Lingg, N., Jungbauer, A., and Satzer, P. (2020). In-situ gradient formation by direct solid addition of buffer components. Journal of chromatography. A, 1634, 461663. doi:10.1016/j.chroma.2020.461663

Beck, J., Heymann, W., von Lieres, E., and Hahn, R. (2020). Compartment model of mixing in a bubble trap and its impact on chromatographic separations. Processes., 8(7), 780. doi:10.3390/pr8070780

Cataldo, A., Sissolak, B., Metzger, K., Budzinski, B., Shirokizawa, O., Luchner, M., Jungbauer, A., and Satzer, P., (2020). Water related impact of energy: Cost and carbon footprint analysis of water for biopharmaceuticals from tap to waste. Chemical Engineering Science: X, 8, 100083. doi:10.1016/j.cesx.2020.100083

Christler, A., Felföldi, E., Mosor, M., Sauer, D., Walch, N., Dürauer, A., and Jungbauer, A. (2020). Semi-automation of process analytics reduces operator effect. Bioprocess Biosyst Eng, 43, 753-764. doi:10.1007/s00449-019-02254-y

Krippl, M., Bofarull-Manzano, I., Duerkop, M., and Dürauer, A. (2020). Hybrid Modeling for Simultaneous Prediction of Flux, Rejection Factor and Concentration in Two-Component Crossflow Ultrafiltration, Processes., 8, 1625. doi:10.3390/pr8121625

Dutra, G., Komuczki, D., Jungbauer, A., and Satzer, P. (2020). Continuous capture of recombinant antibodies by ZnCl2 precipitaion without polyethylene glycol. Engineering in Life Sciences, 20(7), 265-274. doi:10.1002/elsc.201900160

Erian, A., Egermeier, M., Rassinger, A., Marx, H., and Sauer, M. (2020). Identification of the citric acid exporter Cex1 in Yarrowia lipolytica. FEMS Yeast Research, 20(7), foaa055. doi:10.1093/femsyr/foaa055

Krippl, M., Dürauer, A., and Duerkop, M. (2020). Hybrid modeling of cross-flow filtration: Predicting the flux evolution and duration of ultrafiltration processes. Sep. Purif. Technol., 248, 117064. doi:10.1016/j.seppur.2020.117064

Totaro, D., Rothbauer, M., Steiger, M.G., Mayr, T., Wang, H.-Y., Lin, Y.-S., Sauer, M., Altvater, M., Ertl, P., and Mattanovich, D. (2020). Downscaling screening cultures in a multifunctional bioreactor array-on-a-chip for speeding up optimization of yeast-based lactic acid bioproduction. Biotechnol. Bioeng., 117(7), 2046–2057. doi:10.1002/bit.27338 


Cataldo, A., Burgstaller, D., Hribar, G., Jungbauer, A., and Satzer, P. (2019). Economics and ecology: Modelling of continuous primary recovery and capture scenarios for recombinant antibody production. J. Biotechnol, 308, 87-95. doi:10.1016/j.jbiotec.2019.12.001

Sauer, D., Mosor, M., Frank, A.-C., Weiß, F., Christler, A., Walch, N., Jungbauer, A., and Dürauer, A. (2019). A two-step process for capture and purification of human basic fibroblast growth factor from E.coli homogenate: Yield versus endotoxin clearance. Protein Expr. Purif., 153, 70-82. doi:10.1016/j.pep.2018.08.009

Vazulka, S., Fink, M., Egger, E., Jarmer, J., Grabherr R., Cserjan, M., and Striedner, G. (2019). Microbioreactor Cultivations of Fab-Producing Escherichia coli Reveal Genome-Integrated Systems as Suitable for Prospective Studies on Direct Fab Expression Effects. J. Biotechnol, 14(11), 1800637. doi:10.1002/biot.201800637