Master thesis / research internship in Plant structural genomics and genetic diversity at Warsaw University of Life Sciences (WULS)
Location:
Department of Plant Genetics Breeding and Biotechnology
Faculty of Horticulture, Biotechnology and Landscape Architecture
Warsaw University of Life Sciences – SGGW, Warsaw, Poland
Project leader: Dr. Hanna Bolibok-Bragoszewska
Research area: plant structural genomics and genetic diversity
Project title: Influence of selection on a crop plant genome - identification and characterization of sequences targeted by domestication and breeding in rye (Secale cereale L.).
This is a five year research project founded by Polish National Science Center. Depending on the stage on the project you can participate in (among others):
- high-throughput plant DNA isolation
- BAC DNA isolation and BAC library screening
- genotyping of diverse rye accessions using SSR markers
- development of mapping population: growing plants, vernalization, crossing
- preparation of samples for genotyping–by–sequencing analyses or amplicon sequencing using next generation sequencing methods.
- biostatistical analyses of genotyping data: construction of genetic linkage map and analyses of genetic diversity patterns.
- analyses of sequence diversity of selected genes/gene fragments in diverse rye accessions
Recent publications:
- Bolibok-Bragoszewska et al 2014, BMC Plant Biology 14:184, DOI: 10.1186/1471-2229-14-184
- Gawronski et al. 2016 , Frontiers in Plant Science 7: 1600, doi: 10.3389/fpls.2016.01600
Possible participation types:
- execution of research project for Master Thesis
- internship (within Erasmus or Ceepus programmes), at least two months long
Requirements:
- interest in research work
- basic knowledge of genetics and molecular biology
Further information:
Hanna Bolibok-Brÿgoszewska
Webpage
Maÿgorzata Kowalczyk